No. The G17 and G34 can be set up identically. Barrel length has nothing to do with their accuracy. You are only looking at about 3/4 of an inch in sight radius difference. And, in IDPA, you won't be shoot at over 20y hardly at all, anyway.
How is your accuracy with the G17?
Decent, but it can always get better. I was hoping a longer sight radius could help on stages like this:
http://www.idpa.com/blog/post/2013/10/01/California-State-Championship-13-Stage-11-Accuracy-Speaks.aspx